Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885248.1_cds_XP_016439214.1_34788
CDS Infomation

[gene=LOC107765119] [db_xref=GeneID:107765119] [protein=glucan endo-1,3-beta-glucosidase 3-like] [protein_id=XP_016439214.1] [location=complement(join(78901..79069,79250..79277,79895..81148,83875..83962))] [gbkey=CDS]
Sequence

ATGAGGAGGGAAATGGGTTTATTGCTTCATTATTTTCCGCTTGTTCTTCTTTCTCTTTTA
GTAGCTTCTGCTCTTTCTCTTAATGAAGAGGCTTTCGTTGGTGTAAACATTGGGACTGAC
GTCTCAGACATGCCCAGTCCATCTAAGGTGGTGGCCCTCCTCAAAGCACAGCAGATTCGG
CATGTCAGGTTATTTGATGCCGACCAAGCTATGCTACTTGCACTTGCTAATACTGGAATC
CGCGTCACTGTTTCTGTACCAAATGATCAGCTCTTAGGAATTGGTCAGTCCAACTCCACT
GCTGCCAATTGGGTTTCTCGGAATATTCTCACTCATTTTCCAGCCACCAACATCACAGCC
ATAGCCATCGGCTCTGAAGTCCTTACCACTCTTCCTAATGCTGCTCCTGTATTGGTCTCT
GCCATGAGATTTATTTATTCCGCCCTCGTTGCTGCTAATCTTGACTCCAAAATTAAAGTC
TCCACTCCACACTCTTCTTCCATTGTCCTCGACTCATTTCCGCCCTCACAAGCTTTCTTC
AATCGCTCATTGGACCCTGTCATGGTTCCATTGCTCAAATTTTTGCAGTCCACCGGATCC
TATCTTATGCTCAATGTATATCCATATTATGATTATATGAAATCCAATGGTGTGATCCCG
TTGGACTATGCTCTCTTTCGTCCCCTTCCCCCTAACAAGGAAGCTGTTGATGCGAACACA
CTCCTCCACTACACTAATGTATTTGATGCCGTTGTTGATGCAGCATATTTTTCTATGTCC
TACTTGAACTTCACTAACATTCCCATTATAGTGACCGAGTCAGGTTGGCCTTCCAAAGGT
GACTCCTCAGAGCCAGATGCCTCTCTTGACAATGCTAACACTTATAATAGTAACTTGATT
AGGCATGTTCTTAACAACACTGGGACCCCCAAACATCCCGGCATTGCAATTCGTACGTAT
ATTTATGAGCTTTACAATGAAGATCTTAGACCTGGTTCTATTTCGGAGAAGAACTGGGGA
CTCTTCGATTCCAGTGGAATGCCAGTTTATACCATGCACTTGACAGGATCTGGAACGGTG
TTAGCAAATGACACTACAAACCAAACCTATTGTGTTGCAAAGGAAAATGCGGAAAAGAAG
ATGGTGCAAGCTGCGTTGGATTGGGCTTGTGGACCTGGAAAAGTAGACTGTACTCCATTG
TTGCAAGGAAATCCTTGTTATGAACCAAATACTGTGATTGCTCATGCATCATATGCTTTT
GATGCATATTATCGCAAGATGGGCATGGCTGATGGAACATGTGACTTCAATGGGGTTGCT
ACAGTCAGTACGACTGATCCTAGTAATGGGTCTTGTATATATCCAGGAAGTGGAGGGAGA
AATGGTACCTTCACAAATAGCTCTTCGCATGCTCCATCATCAGACTCAACGGCATCTGGC
TGTCATTCACAGTATTCCCATGATGTTCGTACTTTCTTGAGCTCTCTAATTGTTGGTTTG
GTACTCTGCAGTCTACACTGCAGCTTGCTTGTAACATAA

Peptide Sequence

PEP ID

XP_016439214.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Nicotiana tabacum]
Sequence

MRREMGLLLHYFPLVLLSLLVASALSLNEEAFVGVNIGTDVSDMPSPSKVVALLKAQQIR
HVRLFDADQAMLLALANTGIRVTVSVPNDQLLGIGQSNSTAANWVSRNILTHFPATNITA
IAIGSEVLTTLPNAAPVLVSAMRFIYSALVAANLDSKIKVSTPHSSSIVLDSFPPSQAFF
NRSLDPVMVPLLKFLQSTGSYLMLNVYPYYDYMKSNGVIPLDYALFRPLPPNKEAVDANT
LLHYTNVFDAVVDAAYFSMSYLNFTNIPIIVTESGWPSKGDSSEPDASLDNANTYNSNLI
RHVLNNTGTPKHPGIAIRTYIYELYNEDLRPGSISEKNWGLFDSSGMPVYTMHLTGSGTV
LANDTTNQTYCVAKENAEKKMVQAALDWACGPGKVDCTPLLQGNPCYEPNTVIAHASYAF
DAYYRKMGMADGTCDFNGVATVSTTDPSNGSCIYPGSGGRNGTFTNSSSHAPSSDSTASG
CHSQYSHDVRTFLSSLIVGLVLCSLHCSLLVT

Transcript Sequence

Gene sequence data has not been registered.